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Improved lab report edge case parsing

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Jiang Yio 2025-01-14 20:44:45 -05:00
parent 18d6b6f19c
commit 1d276e7bec
1 changed files with 3 additions and 3 deletions
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6
htdocs/reportparser.mjs
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@ -53,15 +53,15 @@ function lab_parse1default(data) {
else x.comment = [line.substring(12)]; else x.comment = [line.substring(12)];
} else console.log('DANGLING:', line); } else console.log('DANGLING:', line);
} else if(m = line.match(/^\b(?<name>.*?)\s{2,}(?<value>.*?)(?: (?<flag>L\*|L|H\*|H))?\s+(?:(?<unit>.{10}) (?<range>.*?)(?: \[(?<site>\d+)\])?)?$/)) { } else if(m = line.match(/^\b(?<name>.*?)\s{2,}(?<value>.*?)(?: (?<flag>L\*|L|H\*|H))?\s+(?:(?<unit>.{10}) (?<range>.*?)(?: \[(?<site>\d+)\])?)?$/)) {
if(x = line.match(/^\b(?<name>.*?)(?<value>(?:positive|negative|reactive|nonreactive|not detected|comment|collected - specimen in lab|test not performed))(?: (?<flag>L\*|L|H\*|H))?\s+(?:(?<unit>.{10}) (?<range>.*?)(?: \[(?<site>\d+)\])?)?$/i)) m = x; if(x = line.match(/^\b(?<name>.*?)(?<value>(?:positive|negative|reactive|nonreactive|detected|not detected|comment|collected - specimen in lab|test not performed))(?: (?<flag>L\*|L|H\*|H))?\s+(?:(?<unit>.{10}) (?<range>.*?)(?: \[(?<site>\d+)\])?)?$/i)) m = x;
if((m.groups.range) && (m.groups.range.startsWith('Ref: '))) m.groups.range = m.groups.range.substring(5); if((m.groups.range) && (m.groups.range.startsWith('Ref: '))) m.groups.range = m.groups.range.substring(5);
results.push(x = m.groups); results.push(x = m.groups);
if((x.value === '') && (m = x.name.match(/^(?<name>.*?)(?<value>(?:[\d\.]+|positive|negative|reactive|not detected|comment|collected - specimen in lab|test not performed))\s*$/i))) { if((x.value === '') && (m = x.name.match(/^(?<name>.*?)(?<value>(?:[\d\.]+|positive|negative|reactive|detected|not detected|comment|collected - specimen in lab|test not performed))\s*$/i))) {
x.name = m.groups.name; x.name = m.groups.name;
x.value = m.groups.value; x.value = m.groups.value;
} }
for(var k in x) if(x[k]) x[k] = x[k] ? x[k].replace(/^\s+|\s+$/g, '') : undefined; for(var k in x) if(x[k]) x[k] = x[k] ? x[k].replace(/^\s+|\s+$/g, '') : undefined;
} else if(m = line.match(/^\b(?<name>.*?)(?<value>(?:[\d\.]+|positive|negative|reactive|nonreactive|not detected|comment|collected - specimen in lab|test not performed))\s*$/i)) { } else if(m = line.match(/^\b(?<name>.*?)(?<value>(?:[\d\.]+|positive|negative|reactive|nonreactive|detected|not detected|comment|collected - specimen in lab|test not performed))(?: (?<flag>L\*|L|H\*|H))?\s*$/i)) {
results.push(x = m.groups); results.push(x = m.groups);
for(var k in x) if(x[k]) x[k] = x[k] ? x[k].replace(/^\s+|\s+$/g, '') : undefined; for(var k in x) if(x[k]) x[k] = x[k] ? x[k].replace(/^\s+|\s+$/g, '') : undefined;
} else if(line.startsWith(' [')) { } else if(line.startsWith(' [')) {